Annotating tertiary motifs in RNA structures
1M5O - hairpin ribozyme/RNA/ribonucleoprotein inhibitor complex
Statistics of tertiary motifs
Motif |
Number |
Coaxial helix |
4 |
A-minor |
2 |
Ribose zipper |
2 |
Pseudoknot |
0 |
Loop-loop receptor |
0 |
D-loop;T-loop |
0 |
Kissing hairpin |
0 |
Annotated diagram (PDF, EPS)
Structure information of tertiary motifs
- Coaxial helix
ID |
Strand 1 |
Strand 2 |
Seq num |
Chain |
Seq num |
Chain |
1 |
1-11,14-21 |
A |
1-8,11-14,85-91 |
B |
2 |
15-23,26-35,78-84 |
B |
46-55,59-60,62-75 |
B |
3 |
1-7,9-11,14-21 |
D |
1-8,11-13,85-91 |
E |
4 |
15-23,26-35,78-84 |
E |
46-55,59-60,62-75 |
E |
- A-minor
- Ribose zipper