RNA Structure

Dual Topology: 5_62


Topological Aspects

  • 5 Vertices


  • Eigenvalues
    • 0.0000000000
      0.8586638570
      3.0000000000
      3.5151381493
      6.6261982918


    Examples of actual RNAs corresponding to this structure from RNA databases: 27

    PDB_Chain Type Discovery Method
    1KUQ_B 16S RIBOSOMAL RNA FRAGMENTX-RAY DIFFRACTION
    1G1X_JI 16S RIBOSOMAL RNAX-RAY DIFFRACTION
    2GO5_9 ribosomal RNAELECTRON MICROSCOPY
    3JCS_8 5S ribosomal RNAELECTRON MICROSCOPY
    3OWI_A DOMAIN II OF GLYCINE RIBOSWITCHX-RAY DIFFRACTION
    3OWW_A DOMAIN II OF GLYCINE RIBOSWITCHX-RAY DIFFRACTION
    3OWZ_A DOMAIN II OF GLYCINE RIBOSWITCHX-RAY DIFFRACTION
    3OX0_A Domain II of glycine riboswitchX-RAY DIFFRACTION
    3OXB_A DOMAIN II OF GLYCINE RIBOSWITCHX-RAY DIFFRACTION
    3OXD_A DOMAIN II OF GLYCINE RIBOSWITCHX-RAY DIFFRACTION
    3OXE_A DOMAIN II OF GLYCINE RIBOSWITCHX-RAY DIFFRACTION
    3OXJ_A DOMAIN II OF GLYCINE RIBOSWITCHX-RAY DIFFRACTION
    3OXM_A DOMAIN II OF GLYCINE RIBOSWITCHX-RAY DIFFRACTION
    4V4P_AB 5S ribosomal RNAX-RAY DIFFRACTION
    4V5G_DB 5S RIBOSOMAL RNAX-RAY DIFFRACTION
    4V8J_BB 5S rRNAX-RAY DIFFRACTION
    5ADY_A 5S RRNAELECTRON MICROSCOPY
    5H1S_C SPINACH CHLOROPLAST 4.5S RRNAELECTRON MICROSCOPY
    5MLC_C 4.8S RIBOSOMAL RNA, CHLOROPLASTICELECTRON MICROSCOPY
    5MMI_W 4.5S RIBOSOMAL RNAELECTRON MICROSCOPY
    5MMM_W 4.5S ribosomal RNAELECTRON MICROSCOPY
    5ND8_B 5S ribosomal RNAELECTRON MICROSCOPY
    5X8P_W 4.8S rRNAELECTRON MICROSCOPY
    5X8T_W 4.8S RRNAELECTRON MICROSCOPY
    6ENU_B 5S Ribosomal RNAELECTRON MICROSCOPY
    6ERI_AB 4.5S ribosomal RNAELECTRON MICROSCOPY
    6GBZ_B 5S RIBOSOMAL RNAELECTRON MICROSCOPY
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