1. Papers about Polymerase Beta (1998.11 -- present)

    1. Linjing Yang, William A. Beard, Samuel H. Wilson, Suse Broyde & Tamar Schlick "Polymerase beta simulations reveal that Arg258 rotation is a slow step rather than large subdomain motion per se", Journal of Molecular Biology, in press (2002).

    2. Tamar Schlick and Linjing Yang "Long-Timestep Biomolecular Dynamics Simulations: LN Performance on a Polymerase /DNA System", In Multiscale Computational Methods in Chemistry and Physics, NATO Science Series: Series III Computer and Systems Sciences, Vol. 177, A. Brandt, J. Bernholc and K. Binder, eds., IOS Press, Amsterdam. (2001).

    3. Linjing Yang, William A. Beard, Samuel H. Wilson, Benoit Roux, Suse Broyde & Tamar Schlick "Local deformations revealed by dynamics simulations of DNA polymerase beta with DNA mismatches at the primer terminus", submitted to Journal of Molecular Biology.


  2. Papers about Three-Stranded DNA (1995.9 -- 1998.6)

    1. Linjing Yang, Maozi Liu, Wenli Deng, Chen Wang, Chunli Bai & Lou-Sing Kan. "Influence of 5-bromodeoxycytosine substitution on triplex DNA stability and conformation", Biophysical Chemistry 1999, 76: 25-34.

    2. Linjing Yang, Chunli Bai, Ciquan Liu, Xiufan Shi & Imshik Lee. "Theoretical studies on conformation comparison of braid-like and triplex DNA", Journal of Molecular Structure 1999, 477: 7-13.

    3. Linjing Yang, Imshik Lee, Chen Wang, Qing Li & Chunli Bai. "Loop and water effect on stability of intertriplex DNA", Journal of Molecular Structure 1998, 442: 275-280.

    4. Linjing Yang, Chen Wang & Chunli Bai. "Influence of loop sequence on relative stability of bimolecular triplex DNA", Science in China (Series C) 1998, 41: 381-386.

    5. Linjing Yang, Maozi Liu & Chunli Bai "Theoretical studies on stability and conformations of intratriplex DNA substituted by bromocytosines", Science in China (Series B) 1998, 41: 646-651.

    6. Linjing Yang, Chunli Bai & Imshik Lee. "Loop effect on the stability of intramolecular triplex DNA", Science in China (Series B) 1997, 40: 650-656.

    7. Maozi Liu, Linjing Yang, Chunli Bai & Lou-Sing Kan. "Effect of selective substitution of 5-bromocytosine on conformation of DNA triple helices", Journal of Biomolecular Structure and Dynamics 1998, 5: 895-903.

    8. Imshik Lee, Wenli Deng, Linjing Yang, & Chunli Bai. "Biphasic transitions of a hairpin hexanucleotied triplex DNA", Biophysical Chemistry 1997, 67: 159-165.


  3. Papers about Duplex-DNA with Ligands (1995.9 -- 1998.6)

    1. Linjing Yang, Xizeng Feng, Imshik Lee & Chunli Bai. "Molecular Structure of Recognition System Host+Guest and DNA complex", Journal of Molecular Structure 1998, 444: 13-20.

    2. Linjing Yang, Xizeng Feng, Imshik Lee & Chunli Bai. "Structural studies on Host+Guest recognition sensory systems", Journal of Inclusion Phenomena and Molecular Recognition in Chemistry 1998, 31: 197-204.

    3. Linjing Yang, Xizeng Feng, Imshik Lee & Chunli Bai. "Structure studies on host+guest recognition sensory system", Chinese Chemical Letters 1997, 8: 707-710.

    4. Xizeng Feng, Zhang Lin, Linjing Yang, Chen Wang & Chunli Bai. "Investigation of the Interaction between acridine orange and bovine serum albumin", Talanta 1998, 47: 1223-1229.


  4. Other Papers (1992.9 -- 1998.6)

    1. Linjing Yang, Xiaoyuan Fu & Shaowen Zhang. "Theoretical studies on nucleophilic vinylic halide substitution", Chinese Chemical Letters 1996, 7: 631-634.

    2. Wenli Deng, Linjing Yang, D. Fujita, H. Nejo, & Chunli Bai. "Silver ions adsorbed to self-assembled monolayers of alkanedithiols on gold surfaces formed Ag-dithiol-Au multilayers structure", Appl. Phys. A 2000, 71: 639-642.

    3. Wenli Deng, Linjing Yang, D. Fujita, H. Nejo, & Chunli Bai. "Multilayers formation of copper ions (Cu2+) deposited onto self-assembled monolayers of alkanedithiols on Au (111) surfaces", Jpn. J. Appl. Phys. 2000, 39: 7B-L 44-47.

    4. Welli Deng, Linjing Yang, & Chunli Bai. "Progress on molecular self-assembly of alkanethiols", Chinese Science Bulletin 1998, 43:705-710.

    5. Qingmin Xu, Jin Ma, Zhongyin Tan, Chen Wang, Linjing Yang, & CHunli Bai. "STM Studies on Absorbed Liquid Crystal on HOPG", Science in China (Series B) 1998, 41: 640-645.