Tree Topology: 6_2
Topological Aspects
- 6 Vertices
- Eigenvalues 0.0000000000
0.3248691261
1.0000000000
1.4608111382
3.0000000000
4.2143197060
Examples of actual RNAs corresponding to this structure from RNA databases: 32
| PDB_Chain | Type | Discovery Method |
|---|---|---|
| 1G1X_JI | 16S RIBOSOMAL RNA | X-RAY DIFFRACTION |
| 1KUQ_B | 16S RIBOSOMAL RNA FRAGMENT | X-RAY DIFFRACTION |
| 2GO5_9 | ribosomal RNA | ELECTRON MICROSCOPY |
| 2NZ4_Q | GlmS ribozyme | X-RAY DIFFRACTION |
| 3JCS_8 | 5S ribosomal RNA | ELECTRON MICROSCOPY |
| 3OWI_A | DOMAIN II OF GLYCINE RIBOSWITCH | X-RAY DIFFRACTION |
| 3OWW_A | DOMAIN II OF GLYCINE RIBOSWITCH | X-RAY DIFFRACTION |
| 3OWZ_A | DOMAIN II OF GLYCINE RIBOSWITCH | X-RAY DIFFRACTION |
| 3OX0_A | Domain II of glycine riboswitch | X-RAY DIFFRACTION |
| 3OXB_A | DOMAIN II OF GLYCINE RIBOSWITCH | X-RAY DIFFRACTION |
| 3OXD_A | DOMAIN II OF GLYCINE RIBOSWITCH | X-RAY DIFFRACTION |
| 3OXE_A | DOMAIN II OF GLYCINE RIBOSWITCH | X-RAY DIFFRACTION |
| 3OXJ_A | DOMAIN II OF GLYCINE RIBOSWITCH | X-RAY DIFFRACTION |
| 3OXM_A | DOMAIN II OF GLYCINE RIBOSWITCH | X-RAY DIFFRACTION |
| 4V4P_AB | 5S ribosomal RNA | X-RAY DIFFRACTION |
| 4V5G_DB | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
| 4V8J_BB | 5S rRNA | X-RAY DIFFRACTION |
| 4W92_C | C-DI-AMP RIBSOSWITCH | X-RAY DIFFRACTION |
| 5AOX_C | ALU JO CONSENSUS RNA | X-RAY DIFFRACTION |
| 5GAM_U | U5 SNRNA | ELECTRON MICROSCOPY |
| 5GAN_U | U5 SNRNA | ELECTRON MICROSCOPY |
| 5MLC_C | 4.8S RIBOSOMAL RNA, CHLOROPLASTIC | ELECTRON MICROSCOPY |
| 5MMI_W | 4.5S RIBOSOMAL RNA | ELECTRON MICROSCOPY |
| 5MMM_W | 4.5S ribosomal RNA | ELECTRON MICROSCOPY |
| 5T5H_H | srRNA4,srRNA4 | ELECTRON MICROSCOPY |
| 5U3G_B | ykkC riboswitch | X-RAY DIFFRACTION |
| 5X8P_W | 4.8S rRNA | ELECTRON MICROSCOPY |
| 5X8T_W | 4.8S RRNA | ELECTRON MICROSCOPY |
| 6D6V_B | RNA (159-MER) | ELECTRON MICROSCOPY |
| 6ENU_B | 5S Ribosomal RNA | ELECTRON MICROSCOPY |
| 6ERI_AB | 4.5S ribosomal RNA | ELECTRON MICROSCOPY |
| 6GBZ_B | 5S RIBOSOMAL RNA | ELECTRON MICROSCOPY |