Annotating tertiary motifs in RNA structures

1U9S - ribonuclease P

Statistics of tertiary motifs

Annotated diagram (PDF, EPS)

Structure information of tertiary motifs

• Coaxial helix

ID	Strand 1		Strand 2
	Seq num	Chain	Seq num	Chain
1	76-79.110-111,115-119	A	222-224,227-234	A
2	80-84,104-107	A	90-94,96-99	A
3	132-136,139-147	A	152-158,160-164,167-168	A
4	176-181,209-217	A	189-194,196-204	A



• A-minor

ID	Residue 1			Residue 2			Residue 3
	Seq	Seq num	Chain	Seq	Seq num	Chain	Seq	Seq num	Chain
1	A	208	A	G	94	A	C	80	A
2	A	185	A	G	163	A	C	135	A
3	A	184	A	G	162	A	C	136	A



• Ribose zipper

ID	Strand 1			Strand 2
	Seq	Seq num	Chain	Seq	Seq num	Chain
1	5′-CC-3′	80,81	A	5′-AA-3′	207,208	A
2	5′-AG-3′	124,125	A	5′-GA-3′	129,130	A
3	5′-CC-3′	135,136	A	5′-AA-3′	184,185	A