Annotating tertiary motifs in RNA structures

1ZCI - HIV-1 dis RNA

Statistics of tertiary motifs

Motif	Number
Coaxial helix	2
A-minor	0
Ribose zipper	0
Pseudoknot	0
Loop-loop receptor	0
D-loop;T-loop	0
Kissing hairpin	2

Annotated diagram (PDF, EPS)

Structure information of tertiary motifs

Coaxial helix

ID	Strand 1		Strand 2
ID	Seq num	Chain	Seq num	Chain
1	1-7,10-15,17-23	A,B,B	1-7,10-15,17-23	B,A,A
2	1-7,10-15,17-23	C,D,D	1-7,10-15,17-23	D,C,C

Kissing hairpin

ID	Strand 1		Strand 2
ID	Seq num	Chain	Seq num	Chain
1	10-15	A	10-15	B
2	10-15	C	10-15	D